STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD82077.1Phage derived protein Gp49-like. (115 aa)    
Predicted Functional Partners:
SDD82125.1
Helix-turn-helix.
 
 
 0.988
SDH41654.1
Helix-turn-helix.
 
 
 0.946
SDD82988.1
Transcriptional regulator, y4mF family.
 
 
 0.812
SDF17085.1
Transcriptional regulator, XRE family.
  
     0.673
SDF17126.1
Phage derived protein Gp49-like.
  
     0.514
SDD82037.1
Hypothetical protein.
       0.489
SDD82002.1
AraC-type DNA-binding protein.
       0.474
SDH41702.1
Phage derived protein Gp49-like.
  
     0.467
SDG91279.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.