STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD84539.1Hypothetical protein. (448 aa)    
Predicted Functional Partners:
SDD84497.1
Uncharacterized conserved protein YeaO, DUF488 family.
       0.718
SDF13013.1
Head domain of trimeric autotransporter adhesin.
  
     0.689
SDE00830.1
Starch-binding associating with outer membrane.
  
     0.672
SDD42795.1
Head domain of trimeric autotransporter adhesin.
  
     0.671
SDG77789.1
Starch-binding associating with outer membrane.
  
     0.659
SDH13739.1
Chaperone of endosialidase.
  
     0.658
SDH13777.1
Chaperone of endosialidase.
  
     0.652
SDH13853.1
Chaperone of endosialidase.
  
     0.650
SDH49389.1
Head domain of trimeric autotransporter adhesin.
  
     0.646
SDD42695.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.634
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.