STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD74146.1Predicted dehydrogenase. (459 aa)    
Predicted Functional Partners:
SDD74066.1
Short chain dehydrogenase.
  
 
  0.640
SDD74107.1
S-formylglutathione hydrolase FrmB.
       0.596
SDD74025.1
Short chain dehydrogenase.
  
 
  0.565
SDF85443.1
Sugar phosphate isomerase/epimerase.
  
 
  0.545
SDF33696.1
Sugar phosphate isomerase/epimerase.
  
 
  0.543
SDE49709.1
Inosose dehydratase.
  
 
  0.537
SDF20823.1
Protein of unknown function.
 
     0.536
SDD74199.1
DinB superfamily protein.
       0.532
SDH16985.1
Tat (twin-arginine translocation) pathway signal sequence.
  
 
  0.527
SDE95380.1
Sugar phosphate isomerase/epimerase.
 
 
  0.496
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.