Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD97289.1 | SDD97333.1 | SAMN04487996_10311 | SAMN04487996_10312 | Hypothetical protein. | Hemolysin, contains CBS domains. | 0.790 |
SDD97289.1 | SDD97374.1 | SAMN04487996_10311 | SAMN04487996_10313 | Hypothetical protein. | ABC transporter. | 0.683 |
SDD97289.1 | SDD97411.1 | SAMN04487996_10311 | SAMN04487996_10314 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.624 |
SDD97289.1 | SDD97450.1 | SAMN04487996_10311 | SAMN04487996_10315 | Hypothetical protein. | Protein of unknown function. | 0.418 |
SDD97333.1 | SDD97289.1 | SAMN04487996_10312 | SAMN04487996_10311 | Hemolysin, contains CBS domains. | Hypothetical protein. | 0.790 |
SDD97333.1 | SDD97374.1 | SAMN04487996_10312 | SAMN04487996_10313 | Hemolysin, contains CBS domains. | ABC transporter. | 0.683 |
SDD97333.1 | SDD97411.1 | SAMN04487996_10312 | SAMN04487996_10314 | Hemolysin, contains CBS domains. | Gliding motility-associated C-terminal domain-containing protein. | 0.624 |
SDD97333.1 | SDD97450.1 | SAMN04487996_10312 | SAMN04487996_10315 | Hemolysin, contains CBS domains. | Protein of unknown function. | 0.418 |
SDD97374.1 | SDD97289.1 | SAMN04487996_10313 | SAMN04487996_10311 | ABC transporter. | Hypothetical protein. | 0.683 |
SDD97374.1 | SDD97333.1 | SAMN04487996_10313 | SAMN04487996_10312 | ABC transporter. | Hemolysin, contains CBS domains. | 0.683 |
SDD97374.1 | SDD97411.1 | SAMN04487996_10313 | SAMN04487996_10314 | ABC transporter. | Gliding motility-associated C-terminal domain-containing protein. | 0.770 |
SDD97374.1 | SDD97450.1 | SAMN04487996_10313 | SAMN04487996_10315 | ABC transporter. | Protein of unknown function. | 0.472 |
SDD97411.1 | SDD97289.1 | SAMN04487996_10314 | SAMN04487996_10311 | Gliding motility-associated C-terminal domain-containing protein. | Hypothetical protein. | 0.624 |
SDD97411.1 | SDD97333.1 | SAMN04487996_10314 | SAMN04487996_10312 | Gliding motility-associated C-terminal domain-containing protein. | Hemolysin, contains CBS domains. | 0.624 |
SDD97411.1 | SDD97374.1 | SAMN04487996_10314 | SAMN04487996_10313 | Gliding motility-associated C-terminal domain-containing protein. | ABC transporter. | 0.770 |
SDD97411.1 | SDD97450.1 | SAMN04487996_10314 | SAMN04487996_10315 | Gliding motility-associated C-terminal domain-containing protein. | Protein of unknown function. | 0.567 |
SDD97411.1 | SDD97493.1 | SAMN04487996_10314 | SAMN04487996_10316 | Gliding motility-associated C-terminal domain-containing protein. | Lysophospholipase L1. | 0.436 |
SDD97450.1 | SDD97289.1 | SAMN04487996_10315 | SAMN04487996_10311 | Protein of unknown function. | Hypothetical protein. | 0.418 |
SDD97450.1 | SDD97333.1 | SAMN04487996_10315 | SAMN04487996_10312 | Protein of unknown function. | Hemolysin, contains CBS domains. | 0.418 |
SDD97450.1 | SDD97374.1 | SAMN04487996_10315 | SAMN04487996_10313 | Protein of unknown function. | ABC transporter. | 0.472 |
page 1 of 2