STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE05838.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
SDF97755.1
SNARE associated Golgi protein.
  
     0.764
SDE25962.1
Gliding motility associated protien GldN.
  
     0.756
SDF20389.1
Hypothetical protein.
  
     0.756
SDF34439.1
Substrate-binding protein.
  
     0.749
SDE25925.1
Gliding motility-associated protein GldM.
  
     0.733
SDG02582.1
Hypothetical protein.
  
     0.730
SDG40834.1
Protein of unknown function.
  
     0.726
SDE62790.1
Hypothetical protein.
  
     0.704
SDE98356.1
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
     0.694
SDE42614.1
TPR repeat-containing protein.
  
     0.689
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.