STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE06407.1Hypothetical protein. (613 aa)    
Predicted Functional Partners:
SDF39653.1
Tetratricopeptide repeat-containing protein.
  
     0.716
SDE42529.1
STAS domain-containing protein.
  
    0.712
SDE62790.1
Hypothetical protein.
  
  
 0.682
SDG39850.1
Hypothetical protein.
  
     0.648
SDD78546.1
Hypothetical protein.
  
     0.647
SDF24280.1
Protein of unknown function.
  
     0.630
SDH32481.1
Hypothetical protein.
  
     0.614
SDE06434.1
Hypothetical protein.
       0.592
SDF38838.1
Hypothetical protein.
  
     0.584
SDD61377.1
Hypothetical protein.
  
     0.580
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.