Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE12186.1 | SDE12236.1 | SAMN04487996_103397 | SAMN04487996_103398 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | AraC-type DNA-binding protein. | 0.572 |
SDE12236.1 | SDE12186.1 | SAMN04487996_103398 | SAMN04487996_103397 | AraC-type DNA-binding protein. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.572 |
SDE12236.1 | SDE61457.1 | SAMN04487996_103398 | SAMN04487996_10626 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.670 |
SDE12236.1 | SDF37380.1 | SAMN04487996_103398 | SAMN04487996_110138 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.677 |
SDE12236.1 | SDF53543.1 | SAMN04487996_103398 | SAMN04487996_11192 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.577 |
SDE12236.1 | SDF92536.1 | SAMN04487996_103398 | SAMN04487996_113210 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.597 |
SDE12236.1 | SDG20108.1 | SAMN04487996_103398 | SAMN04487996_11653 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.670 |
SDE12236.1 | SDG23881.1 | SAMN04487996_103398 | SAMN04487996_116144 | AraC-type DNA-binding protein. | AraC family transcriptional regulator. | 0.565 |
SDE12236.1 | SDG52955.1 | SAMN04487996_103398 | SAMN04487996_119162 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.691 |
SDE12236.1 | SDG89227.1 | SAMN04487996_103398 | SAMN04487996_1252 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.644 |
SDE12236.1 | SDH24544.1 | SAMN04487996_103398 | SAMN04487996_13222 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.582 |
SDE61457.1 | SDE12236.1 | SAMN04487996_10626 | SAMN04487996_103398 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.670 |
SDF37380.1 | SDE12236.1 | SAMN04487996_110138 | SAMN04487996_103398 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.677 |
SDF37380.1 | SDG23881.1 | SAMN04487996_110138 | SAMN04487996_116144 | AraC-type DNA-binding protein. | AraC family transcriptional regulator. | 0.574 |
SDF37380.1 | SDG52955.1 | SAMN04487996_110138 | SAMN04487996_119162 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.426 |
SDF53543.1 | SDE12236.1 | SAMN04487996_11192 | SAMN04487996_103398 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.577 |
SDF53543.1 | SDF92536.1 | SAMN04487996_11192 | SAMN04487996_113210 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.591 |
SDF92536.1 | SDE12236.1 | SAMN04487996_113210 | SAMN04487996_103398 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.597 |
SDF92536.1 | SDF53543.1 | SAMN04487996_113210 | SAMN04487996_11192 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.591 |
SDF92536.1 | SDG23881.1 | SAMN04487996_113210 | SAMN04487996_116144 | AraC-type DNA-binding protein. | AraC family transcriptional regulator. | 0.520 |
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