STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD98856.1iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (325 aa)    
Predicted Functional Partners:
SDF63834.1
Spermidine/putrescine-binding protein.
  
 
 0.975
SDD59875.1
Osmoprotectant transport system permease protein.
 
 
 0.933
SDH39509.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.867
SDF63935.1
ABC-type Mn2+/Zn2+ transport system, ATPase component.
 
  
 
0.816
SDH39548.1
Molybdate transport system substrate-binding protein.
    
 0.791
SDD98814.1
Nitroreductase.
       0.790
SDE32215.1
Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
  0.772
SDE01258.1
ABC-2 type transport system ATP-binding protein.
  
     0.738
SDE72808.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.734
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.666
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.