Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD60586.1 | SDE25028.1 | SAMN04487996_101427 | SAMN04487996_104163 | Hypothetical protein. | WD-40 repeat-containing protein. | 0.998 |
SDD60586.1 | rpoB | SAMN04487996_101427 | SAMN04487996_106352 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
SDE25028.1 | SDD60586.1 | SAMN04487996_104163 | SAMN04487996_101427 | WD-40 repeat-containing protein. | Hypothetical protein. | 0.998 |
SDE25028.1 | SDE28257.1 | SAMN04487996_104163 | SAMN04487996_104249 | WD-40 repeat-containing protein. | Heterogeneous ribonucleoprotein G. | 0.981 |
SDE25028.1 | SDE47417.1 | SAMN04487996_104163 | SAMN04487996_105145 | WD-40 repeat-containing protein. | Metallo-beta-lactamase family protein. | 0.990 |
SDE25028.1 | SDE62593.1 | SAMN04487996_104163 | SAMN04487996_10655 | WD-40 repeat-containing protein. | Metallo-beta-lactamase family protein. | 0.990 |
SDE25028.1 | SDF52759.1 | SAMN04487996_104163 | SAMN04487996_11174 | WD-40 repeat-containing protein. | Phosphoglycerate mutase. | 0.971 |
SDE25028.1 | SDF87251.1 | SAMN04487996_104163 | SAMN04487996_11358 | WD-40 repeat-containing protein. | Acetoin utilization deacetylase AcuC. | 0.991 |
SDE25028.1 | SDG95751.1 | SAMN04487996_104163 | SAMN04487996_12623 | WD-40 repeat-containing protein. | Putative mRNA 3-end processing factor. | 0.990 |
SDE25028.1 | alaS | SAMN04487996_104163 | SAMN04487996_105189 | WD-40 repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.997 |
SDE25028.1 | gpmI | SAMN04487996_104163 | SAMN04487996_109196 | WD-40 repeat-containing protein. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.971 |
SDE25028.1 | rpoB | SAMN04487996_104163 | SAMN04487996_106352 | WD-40 repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.951 |
SDE28257.1 | SDE25028.1 | SAMN04487996_104249 | SAMN04487996_104163 | Heterogeneous ribonucleoprotein G. | WD-40 repeat-containing protein. | 0.981 |
SDE28257.1 | SDE47417.1 | SAMN04487996_104249 | SAMN04487996_105145 | Heterogeneous ribonucleoprotein G. | Metallo-beta-lactamase family protein. | 0.995 |
SDE28257.1 | SDE62593.1 | SAMN04487996_104249 | SAMN04487996_10655 | Heterogeneous ribonucleoprotein G. | Metallo-beta-lactamase family protein. | 0.995 |
SDE28257.1 | SDF52759.1 | SAMN04487996_104249 | SAMN04487996_11174 | Heterogeneous ribonucleoprotein G. | Phosphoglycerate mutase. | 0.999 |
SDE28257.1 | SDG95751.1 | SAMN04487996_104249 | SAMN04487996_12623 | Heterogeneous ribonucleoprotein G. | Putative mRNA 3-end processing factor. | 0.995 |
SDE28257.1 | gpmI | SAMN04487996_104249 | SAMN04487996_109196 | Heterogeneous ribonucleoprotein G. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.999 |
SDE28257.1 | rpoB | SAMN04487996_104249 | SAMN04487996_106352 | Heterogeneous ribonucleoprotein G. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
SDE47417.1 | SDE25028.1 | SAMN04487996_105145 | SAMN04487996_104163 | Metallo-beta-lactamase family protein. | WD-40 repeat-containing protein. | 0.990 |
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