STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE26794.1Hypothetical protein. (540 aa)    
Predicted Functional Partners:
SDE26755.1
Hypothetical protein.
 
     0.936
SDD99208.1
Inosose dehydratase.
  
     0.750
SDE00665.1
Hypothetical protein.
  
  
  0.675
SDH13304.1
Hypothetical protein.
  
     0.624
SDE87420.1
Hypothetical protein.
  
     0.620
SDG52806.1
Protein of unknown function.
  
     0.587
SDG63436.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.551
SDF37830.1
C-terminal domain of CHU protein family protein.
  
     0.508
SDG40273.1
Hypothetical protein.
  
     0.499
SDE00542.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
   0.490
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.