Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD54734.1 | SDE70386.1 | SAMN04487996_101287 | SAMN04487996_106253 | Dual-action HEIGH metallo-peptidase. | Hypothetical protein. | 0.993 |
SDD54734.1 | SDE86118.1 | SAMN04487996_101287 | SAMN04487996_107215 | Dual-action HEIGH metallo-peptidase. | Zinc carboxypeptidase. | 0.678 |
SDD54734.1 | SDG47875.1 | SAMN04487996_101287 | SAMN04487996_11926 | Dual-action HEIGH metallo-peptidase. | Ankyrin repeat-containing protein. | 0.491 |
SDD54734.1 | SDG63527.1 | SAMN04487996_101287 | SAMN04487996_12111 | Dual-action HEIGH metallo-peptidase. | Phenylalanine 4-hydroxylase. | 0.442 |
SDD54734.1 | SDG85678.1 | SAMN04487996_101287 | SAMN04487996_12460 | Dual-action HEIGH metallo-peptidase. | MG2 domain-containing protein. | 0.993 |
SDD54734.1 | ndk | SAMN04487996_101287 | SAMN04487996_109204 | Dual-action HEIGH metallo-peptidase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.951 |
SDE70386.1 | SDD54734.1 | SAMN04487996_106253 | SAMN04487996_101287 | Hypothetical protein. | Dual-action HEIGH metallo-peptidase. | 0.993 |
SDE70386.1 | SDE86118.1 | SAMN04487996_106253 | SAMN04487996_107215 | Hypothetical protein. | Zinc carboxypeptidase. | 0.763 |
SDE70386.1 | SDG57954.1 | SAMN04487996_106253 | SAMN04487996_12048 | Hypothetical protein. | Dual-action HEIGH metallo-peptidase. | 0.993 |
SDE86118.1 | SDD54734.1 | SAMN04487996_107215 | SAMN04487996_101287 | Zinc carboxypeptidase. | Dual-action HEIGH metallo-peptidase. | 0.678 |
SDE86118.1 | SDE70386.1 | SAMN04487996_107215 | SAMN04487996_106253 | Zinc carboxypeptidase. | Hypothetical protein. | 0.763 |
SDE86118.1 | SDG47875.1 | SAMN04487996_107215 | SAMN04487996_11926 | Zinc carboxypeptidase. | Ankyrin repeat-containing protein. | 0.574 |
SDE86118.1 | SDG57954.1 | SAMN04487996_107215 | SAMN04487996_12048 | Zinc carboxypeptidase. | Dual-action HEIGH metallo-peptidase. | 0.719 |
SDE86118.1 | SDG63527.1 | SAMN04487996_107215 | SAMN04487996_12111 | Zinc carboxypeptidase. | Phenylalanine 4-hydroxylase. | 0.466 |
SDE86118.1 | SDG78120.1 | SAMN04487996_107215 | SAMN04487996_12320 | Zinc carboxypeptidase. | Muramoyltetrapeptide carboxypeptidase. | 0.651 |
SDE86118.1 | SDG85678.1 | SAMN04487996_107215 | SAMN04487996_12460 | Zinc carboxypeptidase. | MG2 domain-containing protein. | 0.763 |
SDE86118.1 | era | SAMN04487996_107215 | SAMN04487996_114175 | Zinc carboxypeptidase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.784 |
SDE86118.1 | ndk | SAMN04487996_107215 | SAMN04487996_109204 | Zinc carboxypeptidase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.752 |
SDE86118.1 | rpsE | SAMN04487996_107215 | SAMN04487996_109180 | Zinc carboxypeptidase. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.754 |
SDG47875.1 | SDD54734.1 | SAMN04487996_11926 | SAMN04487996_101287 | Ankyrin repeat-containing protein. | Dual-action HEIGH metallo-peptidase. | 0.491 |
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