Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE71833.1 | SDE79899.1 | SAMN04487996_106293 | SAMN04487996_10725 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | Protein of unknown function (DU1801). | 0.707 |
SDE79862.1 | SDE79899.1 | SAMN04487996_10724 | SAMN04487996_10725 | Hypothetical protein. | Protein of unknown function (DU1801). | 0.421 |
SDE79899.1 | SDE71833.1 | SAMN04487996_10725 | SAMN04487996_106293 | Protein of unknown function (DU1801). | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | 0.707 |
SDE79899.1 | SDE79862.1 | SAMN04487996_10725 | SAMN04487996_10724 | Protein of unknown function (DU1801). | Hypothetical protein. | 0.421 |
SDE79899.1 | SDE79935.1 | SAMN04487996_10725 | SAMN04487996_10726 | Protein of unknown function (DU1801). | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.622 |
SDE79899.1 | SDE79974.1 | SAMN04487996_10725 | SAMN04487996_10727 | Protein of unknown function (DU1801). | TonB family C-terminal domain-containing protein. | 0.451 |
SDE79899.1 | SDG27359.1 | SAMN04487996_10725 | SAMN04487996_1178 | Protein of unknown function (DU1801). | Phytanoyl-CoA dioxygenase (PhyH). | 0.508 |
SDE79935.1 | SDE79899.1 | SAMN04487996_10726 | SAMN04487996_10725 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | Protein of unknown function (DU1801). | 0.622 |
SDE79935.1 | SDE79974.1 | SAMN04487996_10726 | SAMN04487996_10727 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | TonB family C-terminal domain-containing protein. | 0.553 |
SDE79974.1 | SDE79899.1 | SAMN04487996_10727 | SAMN04487996_10725 | TonB family C-terminal domain-containing protein. | Protein of unknown function (DU1801). | 0.451 |
SDE79974.1 | SDE79935.1 | SAMN04487996_10727 | SAMN04487996_10726 | TonB family C-terminal domain-containing protein. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.553 |
SDG27359.1 | SDE79899.1 | SAMN04487996_1178 | SAMN04487996_10725 | Phytanoyl-CoA dioxygenase (PhyH). | Protein of unknown function (DU1801). | 0.508 |