STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE80915.1Hpt domain-containing protein. (104 aa)    
Predicted Functional Partners:
SDF35144.1
PAS domain S-box-containing protein.
  
 0.998
SDF35022.1
Signal transduction histidine kinase.
  
 0.996
SDH21477.1
Signal transduction histidine kinase.
  
 0.996
SDD76430.1
PAS domain S-box-containing protein.
  
 0.992
SDE80944.1
Predicted ATPase.
  
 0.960
SDE44881.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.938
SDE53035.1
PAS domain S-box-containing protein.
  
 0.931
SDD80729.1
PAS domain S-box-containing protein.
  
 0.929
SDG96350.1
PAS domain S-box-containing protein.
  
 0.928
SDD48170.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
 0.878
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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