STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF00034.1Winged helix DNA-binding domain-containing protein. (79 aa)    
Predicted Functional Partners:
SDF00068.1
Hypothetical protein.
 
     0.894
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
     
 0.690
SDD59875.1
Osmoprotectant transport system permease protein.
  
  
 0.529
SDE99999.1
Hypothetical protein.
       0.450
SDF79784.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 
  0.445
SDG92060.1
Putative membrane-bound dehydrogenase domain-containing protein.
   
 
  0.445
SDH13662.1
Putative membrane-bound dehydrogenase domain-containing protein.
   
 
  0.445
SDF00111.1
Diacylglycerol kinase (ATP).
       0.435
SDF00154.1
Uncharacterized membrane protein.
       0.418
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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