STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE95380.1Sugar phosphate isomerase/epimerase. (295 aa)    
Predicted Functional Partners:
SDE50506.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
 
 0.720
SDE95429.1
Alpha/beta hydrolase family protein.
       0.680
SDG37219.1
Predicted dehydrogenase.
  
 
  0.675
SDH12852.1
Predicted dehydrogenase.
 
 
  0.658
SDG13660.1
Predicted dehydrogenase.
 
 
  0.648
SDG91946.1
Predicted dehydrogenase.
 
 
  0.627
SDH04838.1
Predicted dehydrogenase.
 
 
  0.624
SDF22034.1
Predicted dehydrogenase.
  
 
  0.612
SDG27122.1
Predicted dehydrogenase.
  
 
  0.588
SDG37260.1
Predicted dehydrogenase.
  
 
  0.585
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.