STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF21000.1Two component transcriptional regulator, LytTR family. (260 aa)    
Predicted Functional Partners:
SDF20953.1
Pentapeptide repeat-containing protein.
 
   0.961
SDD46236.1
Sensor histidine kinase, LytS/YehU family.
 
 
 0.825
SDD81715.1
Two component regulator propeller.
  
  0.803
SDF40836.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
   0.800
SDF52977.1
Histidine kinase.
  
   0.800
SDF78847.1
GHKL domain-containing protein.
  
   0.800
SDH01581.1
Histidine kinase.
  
   0.800
SDE43980.1
Histidine kinase.
  
   0.799
SDG27394.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
   0.799
SDF61814.1
Histidine kinase.
  
   0.797
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.