STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF22135.1Uncharacterized conserved protein, Alpha-E superfamily. (319 aa)    
Predicted Functional Partners:
SDF05744.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
  
 0.973
SDE71532.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.954
SDF22171.1
Putative proteasome-type protease.
 
    0.914
SDE71573.1
Transglutaminase-like enzyme, putative cysteine protease.
    0.847
SDG70308.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.815
SDF21929.1
Transglutaminase-like enzyme, putative cysteine protease.
 
    0.797
SDH18568.1
Hypothetical protein.
  
  
 0.793
SDH19523.1
Putative proteasome-type protease.
 
    0.781
SDF22205.1
Putative proteasome-type protease.
 
    0.776
SDH35493.1
Transglutaminase-like N-terminal region.
 
    0.768
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.