STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF23087.1Predicted dehydrogenase. (401 aa)    
Predicted Functional Partners:
SDE49709.1
Inosose dehydratase.
  
 
  0.730
SDE50472.1
Inosose dehydratase.
  
 
  0.650
SDE50506.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
  
 0.584
SDF23140.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.580
SDE50702.1
5-deoxy-glucuronate isomerase.
 
  
 0.575
SDG87055.1
Inosose dehydratase.
   
 
  0.553
SDF33696.1
Sugar phosphate isomerase/epimerase.
  
 
  0.537
SDD60369.1
Predicted dehydrogenase.
  
     0.522
SDE24327.1
Predicted dehydrogenase.
  
  
  0.520
SDE63800.1
Sugar phosphate isomerase/epimerase.
 
 
  0.512
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.