Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD46509.1 | SDD51848.1 | SAMN04487996_10193 | SAMN04487996_101219 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.669 |
SDD46509.1 | SDF40512.1 | SAMN04487996_10193 | SAMN04487996_110215 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.804 |
SDD51815.1 | SDD51848.1 | SAMN04487996_101218 | SAMN04487996_101219 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.951 |
SDD51815.1 | SDF40512.1 | SAMN04487996_101218 | SAMN04487996_110215 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.714 |
SDD51848.1 | SDD46509.1 | SAMN04487996_101219 | SAMN04487996_10193 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.669 |
SDD51848.1 | SDD51815.1 | SAMN04487996_101219 | SAMN04487996_101218 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.951 |
SDD51848.1 | SDE10890.1 | SAMN04487996_101219 | SAMN04487996_103367 | Starch-binding associating with outer membrane. | TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region. | 0.636 |
SDD51848.1 | SDE86669.1 | SAMN04487996_101219 | SAMN04487996_107231 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.825 |
SDD51848.1 | SDF25227.1 | SAMN04487996_101219 | SAMN04487996_109314 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.616 |
SDD51848.1 | SDF40512.1 | SAMN04487996_101219 | SAMN04487996_110215 | Starch-binding associating with outer membrane. | SusD family protein. | 0.749 |
SDD51848.1 | SDF40557.1 | SAMN04487996_101219 | SAMN04487996_110216 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.715 |
SDD51848.1 | SDG52983.1 | SAMN04487996_101219 | SAMN04487996_119163 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.438 |
SDD51848.1 | SDG64117.1 | SAMN04487996_101219 | SAMN04487996_12131 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.542 |
SDE10890.1 | SDD51848.1 | SAMN04487996_103367 | SAMN04487996_101219 | TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region. | Starch-binding associating with outer membrane. | 0.636 |
SDE10890.1 | SDF40512.1 | SAMN04487996_103367 | SAMN04487996_110215 | TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region. | SusD family protein. | 0.630 |
SDE86669.1 | SDD51848.1 | SAMN04487996_107231 | SAMN04487996_101219 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.825 |
SDE86669.1 | SDF40512.1 | SAMN04487996_107231 | SAMN04487996_110215 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.733 |
SDF25227.1 | SDD51848.1 | SAMN04487996_109314 | SAMN04487996_101219 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.616 |
SDF25227.1 | SDF40512.1 | SAMN04487996_109314 | SAMN04487996_110215 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.761 |
SDF40512.1 | SDD46509.1 | SAMN04487996_110215 | SAMN04487996_10193 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.804 |
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