STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF42021.1GHKL domain-containing protein. (365 aa)    
Predicted Functional Partners:
SDF79998.1
Two component transcriptional regulator, LytTR family.
  
   0.809
SDD48944.1
Two component transcriptional regulator, LytTR family.
  
  0.806
SDG57762.1
Two component transcriptional regulator, LytTR family.
  
  0.805
SDG89972.1
Two component transcriptional regulator, LytTR family.
  
   0.805
SDH31963.1
Two component transcriptional regulator, LytTR family.
  
   0.803
SDH14587.1
Two component transcriptional regulator, LytTR family.
 
   0.802
SDF78450.1
Two component transcriptional regulator, LytTR family.
  
  0.801
SDG21608.1
Two component transcriptional regulator, LytTR family.
  
   0.801
SDD53216.1
Two component transcriptional regulator, LytTR family.
  
   0.800
SDF62421.1
Two component transcriptional regulator, LytTR family.
 
   0.799
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.