STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF42057.1Carboxypeptidase regulatory-like domain-containing protein. (1051 aa)    
Predicted Functional Partners:
SDF42099.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
     0.708
SDD72959.1
TonB-linked outer membrane protein, SusC/RagA family.
  
  0.604
SDG38344.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  0.576
SDG18014.1
ABC-2 type transport system permease protein.
  
     0.567
SDG18053.1
ABC-2 type transport system permease protein.
  
     0.566
SDD81133.1
Hypothetical protein.
   
  0.519
SDE65849.1
TonB family C-terminal domain-containing protein.
   
  0.519
SDE62790.1
Hypothetical protein.
   
  0.519
SDE86964.1
Surface antigen variable number repeat-containing protein.
   
  0.519
SDE79974.1
TonB family C-terminal domain-containing protein.
   
  0.519
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.