STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF33397.1Predicted nucleic acid-binding protein, contains PIN domain. (148 aa)    
Predicted Functional Partners:
SDF33342.1
N-6 DNA Methylase.
       0.790
SDF33491.1
Hypothetical protein.
       0.775
SDF33437.1
Hypothetical protein.
       0.773
SDF33530.1
Hypothetical protein.
       0.773
SDG00158.1
PIN domain-containing protein.
  
     0.719
SDF33570.1
Ppx/GppA phosphatase family protein.
       0.496
SDF33302.1
Transcriptional regulator, TetR family.
       0.491
SDH09867.1
ParE toxin of type II toxin-antitoxin system, parDE.
  
     0.424
SDF33235.1
Hypothetical protein.
       0.421
SDF33609.1
Hypothetical protein.
       0.406
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.