STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF56710.1Alcohol dehydrogenase, propanol-preferring. (341 aa)    
Predicted Functional Partners:
SDF56756.1
Mg2+-importing ATPase.
 
   0.810
SDE71044.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.714
SDF77892.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
    0.673
SDE63339.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.671
SDF00424.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.671
SDF56793.1
Putative NADPH-quinone reductase (modulator of drug activity B).
       0.665
SDF56615.1
CAAX protease self-immunity.
 
     0.577
SDD82651.1
Glutathione-independent formaldehyde dehydrogenase.
 
  0.555
SDG09085.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
   
  0.543
SDD73467.1
Quinoprotein glucose dehydrogenase.
   
 
 0.511
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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