STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF60233.1Putative intracellular protease/amidase. (222 aa)    
Predicted Functional Partners:
SDF87251.1
Acetoin utilization deacetylase AcuC.
    
  0.827
rpsJ
SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.653
SDE61691.1
Major royal jelly protein.
 
 
 
  0.611
SDE44953.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  0.597
SDG61398.1
Catalase; Belongs to the catalase family.
  
  0.597
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.546
SDF60272.1
Quinol monooxygenase YgiN.
       0.542
SDF60201.1
AraC-type DNA-binding protein.
       0.533
SDF60305.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.523
SDE32548.1
Fe-S oxidoreductase.
    
  0.516
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.