STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF63099.1NADPH-dependent FMN reductase. (132 aa)    
Predicted Functional Partners:
SDF63062.1
Hypothetical protein.
      0.896
SDF40050.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
   
    0.820
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
  0.629
SDE44953.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.627
SDG41486.1
Hypothetical protein.
   
    0.579
SDG84328.1
Hypothetical protein.
   
    0.579
SDF63025.1
Cupin domain-containing protein.
  
    0.573
SDG51337.1
LysM domain-containing protein.
   
  
 0.571
SDD72638.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.555
SDE26954.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.555
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.