STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF63225.1NADPH:quinone reductase. (312 aa)    
Predicted Functional Partners:
SDG65781.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.869
fabZ
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.690
SDG65814.1
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
  
 0.661
SDE71044.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.657
SDF63189.1
Response regulator receiver domain-containing protein.
 
     0.592
SDF63262.1
Hypothetical protein.
       0.528
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
  0.511
SDF60710.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
  
  0.508
SDD77140.1
Allosteric NADP-dependent malic enzyme.
    
 0.479
SDG91561.1
2-hydroxy-3-oxopropionate reductase.
  
  
  0.479
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.