STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF64291.1SnoaL-like domain-containing protein. (107 aa)    
Predicted Functional Partners:
SDF64377.1
Short chain dehydrogenase.
 
  
  0.914
SDF64337.1
Enoyl-(Acyl carrier protein) reductase.
 
  
  0.906
SDE11710.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.816
SDF64417.1
Transcriptional regulator, HxlR family.
 
     0.620
SDE42496.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.535
SDF65274.1
Hypothetical protein.
  
    0.520
SDG47915.1
Protein of unknown function.
  
     0.506
SDG60911.1
Protein of unknown function.
  
     0.480
SDD72688.1
Cytochrome P450.
   
 
  0.463
SDG60946.1
Protein of unknown function.
  
     0.440
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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