STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF75570.1Histidine kinase. (358 aa)    
Predicted Functional Partners:
SDF75688.1
Two component transcriptional regulator, LytTR family.
 
   0.920
SDG57762.1
Two component transcriptional regulator, LytTR family.
  
  0.808
SDF86060.1
Two component transcriptional regulator, LytTR family.
  
  0.807
SDG89972.1
Two component transcriptional regulator, LytTR family.
  
   0.807
SDD48944.1
Two component transcriptional regulator, LytTR family.
  
  0.806
SDD50574.1
Two component transcriptional regulator, LytTR family.
  
  0.806
SDF73352.1
Two component transcriptional regulator, LytTR family.
  
  0.806
SDF52889.1
Two component transcriptional regulator, LytTR family.
  
  0.805
SDF79998.1
Two component transcriptional regulator, LytTR family.
  
   0.805
SDG29454.1
Two component transcriptional regulator, LytTR family.
  
  0.805
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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