STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF71757.1Two component transcriptional regulator, LuxR family. (213 aa)    
Predicted Functional Partners:
SDE53035.1
PAS domain S-box-containing protein.
  
 0.991
SDD80729.1
PAS domain S-box-containing protein.
   
 0.963
SDF35022.1
Signal transduction histidine kinase.
   
 0.917
SDH21477.1
Signal transduction histidine kinase.
   
 0.896
SDF25539.1
Tetratricopeptide repeat-containing protein.
  
  0.881
SDG75142.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.861
SDG36764.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.848
SDE27587.1
Signal transduction histidine kinase.
  
  0.847
SDE80944.1
Predicted ATPase.
  
 0.840
SDG90240.1
Two component regulator propeller.
 
  0.840
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.