STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF72848.1Por secretion system C-terminal sorting domain-containing protein. (163 aa)    
Predicted Functional Partners:
SDF40050.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.859
SDE68314.1
Amino acid/polyamine/organocation transporter, APC superfamily.
    
  0.854
SDF03201.1
Amino acid/polyamine/organocation transporter, APC superfamily.
    
  0.854
SDF03279.1
Ethanolamine:proton symporter, EAT family.
    
  0.854
SDF15667.1
Amino acid/polyamine/organocation transporter, APC superfamily.
    
  0.854
SDH31862.1
Amino acid/polyamine/organocation transporter, APC superfamily.
    
  0.854
SDD81369.1
4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,TIGR02401.
  
 
 0.847
SDD81486.1
Trehalose synthase /maltokinase.
  
 0.816
SDF72806.1
Thermolysin metallopeptidase, alpha-helical domain.
       0.689
SDG84975.1
Starch phosphorylase.
 
 0.653
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.