Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD51299.1 | SDF88192.1 | SAMN04487996_101206 | SAMN04487996_11385 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.704 |
SDE84461.1 | SDF88192.1 | SAMN04487996_107165 | SAMN04487996_11385 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.675 |
SDF39359.1 | SDF88192.1 | SAMN04487996_110187 | SAMN04487996_11385 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.660 |
SDF88170.1 | SDF88192.1 | SAMN04487996_11384 | SAMN04487996_11385 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.926 |
SDF88170.1 | SDF88217.1 | SAMN04487996_11384 | SAMN04487996_11386 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.716 |
SDF88170.1 | SDF88245.1 | SAMN04487996_11384 | SAMN04487996_11387 | TonB-linked outer membrane protein, SusC/RagA family. | Major paralogous domain-containing protein. | 0.625 |
SDF88170.1 | SDF88282.1 | SAMN04487996_11384 | SAMN04487996_11388 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.627 |
SDF88192.1 | SDD51299.1 | SAMN04487996_11385 | SAMN04487996_101206 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.704 |
SDF88192.1 | SDE84461.1 | SAMN04487996_11385 | SAMN04487996_107165 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.675 |
SDF88192.1 | SDF39359.1 | SAMN04487996_11385 | SAMN04487996_110187 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.660 |
SDF88192.1 | SDF88170.1 | SAMN04487996_11385 | SAMN04487996_11384 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.926 |
SDF88192.1 | SDF88217.1 | SAMN04487996_11385 | SAMN04487996_11386 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.802 |
SDF88192.1 | SDF88245.1 | SAMN04487996_11385 | SAMN04487996_11387 | Starch-binding associating with outer membrane. | Major paralogous domain-containing protein. | 0.718 |
SDF88192.1 | SDF88282.1 | SAMN04487996_11385 | SAMN04487996_11388 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.692 |
SDF88192.1 | SDG60624.1 | SAMN04487996_11385 | SAMN04487996_120117 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.664 |
SDF88192.1 | SDH14007.1 | SAMN04487996_11385 | SAMN04487996_12961 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.729 |
SDF88192.1 | SDH14077.1 | SAMN04487996_11385 | SAMN04487996_12963 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.759 |
SDF88217.1 | SDF88170.1 | SAMN04487996_11386 | SAMN04487996_11384 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.716 |
SDF88217.1 | SDF88192.1 | SAMN04487996_11386 | SAMN04487996_11385 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.802 |
SDF88217.1 | SDF88245.1 | SAMN04487996_11386 | SAMN04487996_11387 | Hypothetical protein. | Major paralogous domain-containing protein. | 0.718 |
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