Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD59950.1 | SDF97755.1 | SAMN04487996_101410 | SAMN04487996_11448 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | SNARE associated Golgi protein. | 0.652 |
SDD59950.1 | gcvH | SAMN04487996_101410 | SAMN04487996_109289 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.969 |
SDD59950.1 | gcvP | SAMN04487996_101410 | SAMN04487996_11863 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.901 |
SDD59950.1 | nadK | SAMN04487996_101410 | SAMN04487996_114140 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.678 |
SDE05838.1 | SDE25925.1 | SAMN04487996_103225 | SAMN04487996_104189 | Hypothetical protein. | Gliding motility-associated protein GldM. | 0.733 |
SDE05838.1 | SDE25962.1 | SAMN04487996_103225 | SAMN04487996_104190 | Hypothetical protein. | Gliding motility associated protien GldN. | 0.756 |
SDE05838.1 | SDE64245.1 | SAMN04487996_103225 | SAMN04487996_106100 | Hypothetical protein. | Barstar (barnase inhibitor). | 0.575 |
SDE05838.1 | SDF97755.1 | SAMN04487996_103225 | SAMN04487996_11448 | Hypothetical protein. | SNARE associated Golgi protein. | 0.764 |
SDE05838.1 | SDG02582.1 | SAMN04487996_103225 | SAMN04487996_114167 | Hypothetical protein. | Hypothetical protein. | 0.730 |
SDE05838.1 | SDG40834.1 | SAMN04487996_103225 | SAMN04487996_118111 | Hypothetical protein. | Protein of unknown function. | 0.726 |
SDE25925.1 | SDE05838.1 | SAMN04487996_104189 | SAMN04487996_103225 | Gliding motility-associated protein GldM. | Hypothetical protein. | 0.733 |
SDE25925.1 | SDE25962.1 | SAMN04487996_104189 | SAMN04487996_104190 | Gliding motility-associated protein GldM. | Gliding motility associated protien GldN. | 0.925 |
SDE25925.1 | SDF97755.1 | SAMN04487996_104189 | SAMN04487996_11448 | Gliding motility-associated protein GldM. | SNARE associated Golgi protein. | 0.685 |
SDE25925.1 | SDG02582.1 | SAMN04487996_104189 | SAMN04487996_114167 | Gliding motility-associated protein GldM. | Hypothetical protein. | 0.478 |
SDE25925.1 | SDG40834.1 | SAMN04487996_104189 | SAMN04487996_118111 | Gliding motility-associated protein GldM. | Protein of unknown function. | 0.726 |
SDE25962.1 | SDE05838.1 | SAMN04487996_104190 | SAMN04487996_103225 | Gliding motility associated protien GldN. | Hypothetical protein. | 0.756 |
SDE25962.1 | SDE25925.1 | SAMN04487996_104190 | SAMN04487996_104189 | Gliding motility associated protien GldN. | Gliding motility-associated protein GldM. | 0.925 |
SDE25962.1 | SDE64245.1 | SAMN04487996_104190 | SAMN04487996_106100 | Gliding motility associated protien GldN. | Barstar (barnase inhibitor). | 0.497 |
SDE25962.1 | SDF97755.1 | SAMN04487996_104190 | SAMN04487996_11448 | Gliding motility associated protien GldN. | SNARE associated Golgi protein. | 0.677 |
SDE25962.1 | SDG02582.1 | SAMN04487996_104190 | SAMN04487996_114167 | Gliding motility associated protien GldN. | Hypothetical protein. | 0.546 |
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