STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG23419.1Signal transduction histidine kinase. (1375 aa)    
Predicted Functional Partners:
SDD48170.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
0.999
SDD76430.1
PAS domain S-box-containing protein.
 
0.999
SDD80729.1
PAS domain S-box-containing protein.
 
0.999
SDE04295.1
PAS domain S-box-containing protein.
 
0.999
SDE53035.1
PAS domain S-box-containing protein.
 
0.999
SDE44881.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
0.999
SDE80944.1
Predicted ATPase.
 
0.999
SDF35022.1
Signal transduction histidine kinase.
 
0.999
SDF35144.1
PAS domain S-box-containing protein.
 
0.999
SDG96350.1
PAS domain S-box-containing protein.
 
0.999
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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