Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE21402.1 | SDG20656.1 | SAMN04487996_10466 | SAMN04487996_11666 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.450 |
SDE96012.1 | SDG20656.1 | SAMN04487996_10851 | SAMN04487996_11666 | Protein of unknown function. | Hypothetical protein. | 0.485 |
SDG20571.1 | SDG20621.1 | SAMN04487996_11664 | SAMN04487996_11665 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.915 |
SDG20571.1 | SDG20656.1 | SAMN04487996_11664 | SAMN04487996_11666 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.430 |
SDG20621.1 | SDG20571.1 | SAMN04487996_11665 | SAMN04487996_11664 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.915 |
SDG20621.1 | SDG20656.1 | SAMN04487996_11665 | SAMN04487996_11666 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.506 |
SDG20656.1 | SDE21402.1 | SAMN04487996_11666 | SAMN04487996_10466 | Hypothetical protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.450 |
SDG20656.1 | SDE96012.1 | SAMN04487996_11666 | SAMN04487996_10851 | Hypothetical protein. | Protein of unknown function. | 0.485 |
SDG20656.1 | SDG20571.1 | SAMN04487996_11666 | SAMN04487996_11664 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.430 |
SDG20656.1 | SDG20621.1 | SAMN04487996_11666 | SAMN04487996_11665 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.506 |