Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG33374.1 | SDG33402.1 | SAMN04487996_117185 | SAMN04487996_117186 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.539 |
SDG33374.1 | SDG33467.1 | SAMN04487996_117185 | SAMN04487996_117188 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.466 |
SDG33374.1 | miaA-2 | SAMN04487996_117185 | SAMN04487996_117187 | Outer membrane protein beta-barrel domain-containing protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.541 |
SDG33402.1 | SDG33374.1 | SAMN04487996_117186 | SAMN04487996_117185 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.539 |
SDG33402.1 | SDG33467.1 | SAMN04487996_117186 | SAMN04487996_117188 | Hypothetical protein. | Hypothetical protein. | 0.664 |
SDG33402.1 | SDG33495.1 | SAMN04487996_117186 | SAMN04487996_117189 | Hypothetical protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.404 |
SDG33402.1 | miaA-2 | SAMN04487996_117186 | SAMN04487996_117187 | Hypothetical protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.892 |
SDG33467.1 | SDG33374.1 | SAMN04487996_117188 | SAMN04487996_117185 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.466 |
SDG33467.1 | SDG33402.1 | SAMN04487996_117188 | SAMN04487996_117186 | Hypothetical protein. | Hypothetical protein. | 0.664 |
SDG33467.1 | SDG33495.1 | SAMN04487996_117188 | SAMN04487996_117189 | Hypothetical protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.402 |
SDG33467.1 | miaA-2 | SAMN04487996_117188 | SAMN04487996_117187 | Hypothetical protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.664 |
SDG33495.1 | SDG33402.1 | SAMN04487996_117189 | SAMN04487996_117186 | Citrate synthase; Belongs to the citrate synthase family. | Hypothetical protein. | 0.404 |
SDG33495.1 | SDG33467.1 | SAMN04487996_117189 | SAMN04487996_117188 | Citrate synthase; Belongs to the citrate synthase family. | Hypothetical protein. | 0.402 |
SDG33495.1 | miaA-2 | SAMN04487996_117189 | SAMN04487996_117187 | Citrate synthase; Belongs to the citrate synthase family. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.407 |
miaA-2 | SDG33374.1 | SAMN04487996_117187 | SAMN04487996_117185 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Outer membrane protein beta-barrel domain-containing protein. | 0.541 |
miaA-2 | SDG33402.1 | SAMN04487996_117187 | SAMN04487996_117186 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Hypothetical protein. | 0.892 |
miaA-2 | SDG33467.1 | SAMN04487996_117187 | SAMN04487996_117188 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Hypothetical protein. | 0.664 |
miaA-2 | SDG33495.1 | SAMN04487996_117187 | SAMN04487996_117189 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.407 |