Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE28817.1 | SDG42216.1 | SAMN04487996_104263 | SAMN04487996_118151 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.890 |
SDE28817.1 | gpsA | SAMN04487996_104263 | SAMN04487996_104134 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.775 |
SDE28817.1 | plsY | SAMN04487996_104263 | SAMN04487996_10659 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.423 |
SDF55737.1 | SDG42216.1 | SAMN04487996_111139 | SAMN04487996_118151 | Ca2+-transporting ATPase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.648 |
SDF56756.1 | SDG42216.1 | SAMN04487996_111162 | SAMN04487996_118151 | Mg2+-importing ATPase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.648 |
SDF57209.1 | SDG42216.1 | SAMN04487996_111172 | SAMN04487996_118151 | Ca2+-transporting ATPase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.648 |
SDG42187.1 | SDG42216.1 | SAMN04487996_118150 | SAMN04487996_118151 | Hypothetical protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.704 |
SDG42216.1 | SDE28817.1 | SAMN04487996_118151 | SAMN04487996_104263 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.890 |
SDG42216.1 | SDF55737.1 | SAMN04487996_118151 | SAMN04487996_111139 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Ca2+-transporting ATPase. | 0.648 |
SDG42216.1 | SDF56756.1 | SAMN04487996_118151 | SAMN04487996_111162 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Mg2+-importing ATPase. | 0.648 |
SDG42216.1 | SDF57209.1 | SAMN04487996_118151 | SAMN04487996_111172 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Ca2+-transporting ATPase. | 0.648 |
SDG42216.1 | SDG42187.1 | SAMN04487996_118151 | SAMN04487996_118150 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.704 |
SDG42216.1 | SDG48718.1 | SAMN04487996_118151 | SAMN04487996_11947 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Rubredoxin. | 0.590 |
SDG42216.1 | glyA | SAMN04487996_118151 | SAMN04487996_114219 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.593 |
SDG42216.1 | gpsA | SAMN04487996_118151 | SAMN04487996_104134 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.702 |
SDG42216.1 | plsX | SAMN04487996_118151 | SAMN04487996_118144 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.676 |
SDG42216.1 | plsY | SAMN04487996_118151 | SAMN04487996_10659 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.894 |
SDG48718.1 | SDG42216.1 | SAMN04487996_11947 | SAMN04487996_118151 | Rubredoxin. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.590 |
glyA | SDG42216.1 | SAMN04487996_114219 | SAMN04487996_118151 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.593 |
gpsA | SDE28817.1 | SAMN04487996_104134 | SAMN04487996_104263 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.775 |
page 1 of 2