Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE79298.1 | SDG38211.1 | SAMN04487996_1078 | SAMN04487996_11840 | Biopolymer transport protein ExbD/TolR. | Outer membrane transport energization protein ExbB. | 0.998 |
SDE79298.1 | SDG38260.1 | SAMN04487996_1078 | SAMN04487996_11841 | Biopolymer transport protein ExbD/TolR. | Outer membrane transport energization protein ExbD. | 0.795 |
SDE79298.1 | SDG38344.1 | SAMN04487996_1078 | SAMN04487996_11843 | Biopolymer transport protein ExbD/TolR. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.895 |
SDE79298.1 | SDG38426.1 | SAMN04487996_1078 | SAMN04487996_11845 | Biopolymer transport protein ExbD/TolR. | Phosphate ABC transporter substrate-binding protein, PhoT family. | 0.782 |
SDE79298.1 | SDG38466.1 | SAMN04487996_1078 | SAMN04487996_11846 | Biopolymer transport protein ExbD/TolR. | Tfp pilus assembly protein PilF. | 0.737 |
SDG38211.1 | SDE79298.1 | SAMN04487996_11840 | SAMN04487996_1078 | Outer membrane transport energization protein ExbB. | Biopolymer transport protein ExbD/TolR. | 0.998 |
SDG38211.1 | SDG38260.1 | SAMN04487996_11840 | SAMN04487996_11841 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbD. | 0.999 |
SDG38211.1 | SDG38301.1 | SAMN04487996_11840 | SAMN04487996_11842 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein ExbD. | 0.999 |
SDG38211.1 | SDG38344.1 | SAMN04487996_11840 | SAMN04487996_11843 | Outer membrane transport energization protein ExbB. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.946 |
SDG38211.1 | SDG38388.1 | SAMN04487996_11840 | SAMN04487996_11844 | Outer membrane transport energization protein ExbB. | Hypothetical protein. | 0.479 |
SDG38211.1 | SDG38426.1 | SAMN04487996_11840 | SAMN04487996_11845 | Outer membrane transport energization protein ExbB. | Phosphate ABC transporter substrate-binding protein, PhoT family. | 0.883 |
SDG38211.1 | SDG38466.1 | SAMN04487996_11840 | SAMN04487996_11846 | Outer membrane transport energization protein ExbB. | Tfp pilus assembly protein PilF. | 0.803 |
SDG38260.1 | SDE79298.1 | SAMN04487996_11841 | SAMN04487996_1078 | Outer membrane transport energization protein ExbD. | Biopolymer transport protein ExbD/TolR. | 0.795 |
SDG38260.1 | SDG38211.1 | SAMN04487996_11841 | SAMN04487996_11840 | Outer membrane transport energization protein ExbD. | Outer membrane transport energization protein ExbB. | 0.999 |
SDG38260.1 | SDG38301.1 | SAMN04487996_11841 | SAMN04487996_11842 | Outer membrane transport energization protein ExbD. | Outer membrane transport energization protein ExbD. | 0.933 |
SDG38260.1 | SDG38344.1 | SAMN04487996_11841 | SAMN04487996_11843 | Outer membrane transport energization protein ExbD. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.961 |
SDG38260.1 | SDG38388.1 | SAMN04487996_11841 | SAMN04487996_11844 | Outer membrane transport energization protein ExbD. | Hypothetical protein. | 0.624 |
SDG38260.1 | SDG38426.1 | SAMN04487996_11841 | SAMN04487996_11845 | Outer membrane transport energization protein ExbD. | Phosphate ABC transporter substrate-binding protein, PhoT family. | 0.917 |
SDG38260.1 | SDG38466.1 | SAMN04487996_11841 | SAMN04487996_11846 | Outer membrane transport energization protein ExbD. | Tfp pilus assembly protein PilF. | 0.860 |
SDG38301.1 | SDG38211.1 | SAMN04487996_11842 | SAMN04487996_11840 | Outer membrane transport energization protein ExbD. | Outer membrane transport energization protein ExbB. | 0.999 |
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