STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG52736.1Glucose/arabinose dehydrogenase, beta-propeller fold. (437 aa)    
Predicted Functional Partners:
SDG52704.1
Hypothetical protein.
       0.546
SDD73467.1
Quinoprotein glucose dehydrogenase.
  
  
  0.483
SDE67025.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
   
 
  0.481
SDG19939.1
Quinoprotein glucose dehydrogenase.
  
  
  0.473
SDF76058.1
Quinoprotein glucose dehydrogenase.
  
  
  0.469
SDF40474.1
Quinoprotein glucose dehydrogenase.
  
  
  0.466
SDF16344.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.430
SDF80245.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.404
SDG43574.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
  
  0.401
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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