STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG48076.1Predicted nucleic acid-binding protein, contains PIN domain. (135 aa)    
Predicted Functional Partners:
SDG48038.1
Hypothetical protein.
       0.773
SDE99502.1
Uncharacterized conserved protein, DUF433 family.
  
     0.609
SDG95827.1
Uncharacterized conserved protein, DUF433 family.
  
     0.588
SDH32374.1
Uncharacterized conserved protein, DUF433 family.
  
     0.569
SDE08740.1
Uncharacterized conserved protein, DUF433 family.
  
     0.543
SDG09863.1
Uncharacterized conserved protein, DUF433 family.
  
     0.519
SDF50076.1
Hypothetical protein.
  
     0.517
SDG12361.1
Putative transposase, YhgA-like.
  
     0.505
SDG49212.1
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain).
  
     0.475
SDF01998.1
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain).
  
     0.474
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
Server load: low (18%) [HD]