STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG67112.1Cytochrome c. (1144 aa)    
Predicted Functional Partners:
SDH04940.1
Cytochrome c.
 
  
 
0.916
SDH50484.1
Cytochrome c.
 
  
 
0.914
SDF76094.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
 
 0.867
SDE87001.1
Putative heme-binding domain-containing protein.
 
 
 0.856
SDG12553.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
  
 
0.855
SDH19854.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
 
 0.854
SDE96638.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
 
 0.846
SDD73823.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
 
0.832
SDG84676.1
Cytochrome c551/c552.
 
  
 
0.811
SDE07506.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
 
 0.809
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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