Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD59989.1 | SDG74187.1 | SAMN04487996_101411 | SAMN04487996_122134 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.638 |
SDD59989.1 | SDG74286.1 | SAMN04487996_101411 | SAMN04487996_122137 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.596 |
SDG31269.1 | SDG74187.1 | SAMN04487996_117121 | SAMN04487996_122134 | DNA polymerase V; Belongs to the peptidase S24 family. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.838 |
SDG31269.1 | recA | SAMN04487996_117121 | SAMN04487996_105341 | DNA polymerase V; Belongs to the peptidase S24 family. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.998 |
SDG74081.1 | SDG74114.1 | SAMN04487996_122131 | SAMN04487996_122132 | Cytochrome c. | Protein SCO1/2. | 0.891 |
SDG74081.1 | SDG74149.1 | SAMN04487996_122131 | SAMN04487996_122133 | Cytochrome c. | Hypothetical protein. | 0.802 |
SDG74081.1 | SDG74187.1 | SAMN04487996_122131 | SAMN04487996_122134 | Cytochrome c. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.720 |
SDG74081.1 | SDG74255.1 | SAMN04487996_122131 | SAMN04487996_122136 | Cytochrome c. | Protein of unknown function. | 0.434 |
SDG74081.1 | SDG74286.1 | SAMN04487996_122131 | SAMN04487996_122137 | Cytochrome c. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.432 |
SDG74114.1 | SDG74081.1 | SAMN04487996_122132 | SAMN04487996_122131 | Protein SCO1/2. | Cytochrome c. | 0.891 |
SDG74114.1 | SDG74149.1 | SAMN04487996_122132 | SAMN04487996_122133 | Protein SCO1/2. | Hypothetical protein. | 0.799 |
SDG74114.1 | SDG74187.1 | SAMN04487996_122132 | SAMN04487996_122134 | Protein SCO1/2. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.716 |
SDG74114.1 | SDG74255.1 | SAMN04487996_122132 | SAMN04487996_122136 | Protein SCO1/2. | Protein of unknown function. | 0.432 |
SDG74114.1 | SDG74286.1 | SAMN04487996_122132 | SAMN04487996_122137 | Protein SCO1/2. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.443 |
SDG74149.1 | SDG74081.1 | SAMN04487996_122133 | SAMN04487996_122131 | Hypothetical protein. | Cytochrome c. | 0.802 |
SDG74149.1 | SDG74114.1 | SAMN04487996_122133 | SAMN04487996_122132 | Hypothetical protein. | Protein SCO1/2. | 0.799 |
SDG74149.1 | SDG74187.1 | SAMN04487996_122133 | SAMN04487996_122134 | Hypothetical protein. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.719 |
SDG74149.1 | SDG74255.1 | SAMN04487996_122133 | SAMN04487996_122136 | Hypothetical protein. | Protein of unknown function. | 0.471 |
SDG74149.1 | SDG74286.1 | SAMN04487996_122133 | SAMN04487996_122137 | Hypothetical protein. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.471 |
SDG74187.1 | SDD59989.1 | SAMN04487996_122134 | SAMN04487996_101411 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.638 |
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