STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG80566.1Glycosyltransferase involved in cell wall bisynthesis. (407 aa)    
Predicted Functional Partners:
SDG80681.1
Hypothetical protein.
 
 
  0.931
SDG80601.1
Hypothetical protein.
 
     0.881
SDG80640.1
Hypothetical protein.
 
     0.832
SDG80447.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.827
SDG80718.1
Glycosyl transferase family 2.
  
 
  0.797
SDG80280.1
Hypothetical protein.
 
    0.777
SDG80353.1
Lipopolysaccharide transport system ATP-binding protein.
 
 
 0.769
SDG80761.1
Hypothetical protein.
       0.752
SDG80235.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
 
 
  0.750
SDG80394.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.731
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.