STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG86681.1Putative membrane protein. (187 aa)    
Predicted Functional Partners:
SDG86527.1
DNA topoisomerase-1.
 
     0.543
SDG86644.1
Response regulator receiver domain-containing protein.
       0.521
SDG86760.1
Phytoene dehydrogenase-related protein.
 
     0.508
SDG86607.1
Heme oxygenase.
       0.468
SDG86488.1
Conserved hypothetical protein.
 
    0.460
SDG86567.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
       0.457
SDG86723.1
Arylsulfatase A.
       0.442
SDG58713.1
Glycosyl transferases group 1.
  
     0.430
SDD81486.1
Trehalose synthase /maltokinase.
  
    0.412
SDE61691.1
Major royal jelly protein.
  
     0.403
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.