STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH08283.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SDH08324.1
Cytochrome c peroxidase.
 
     0.915
SDG90671.1
Hypothetical protein.
 
     0.788
SDG90627.1
Cytochrome c peroxidase.
 
     0.709
SDH08362.1
Hypothetical protein.
 
     0.672
SDH08242.1
Hypothetical protein.
 
     0.609
SDF23842.1
Hypothetical protein.
  
     0.511
SDH08412.1
Outer membrane receptor proteins, mostly Fe transport.
       0.498
SDH08446.1
PepSY-associated TM region.
       0.498
SDH21709.1
Cytochrome c peroxidase.
 
     0.483
SDG28172.1
Cytochrome c peroxidase.
 
     0.476
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.