STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30942.1Protein of unknown function. (498 aa)    
Predicted Functional Partners:
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
   
 
  0.892
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.862
SDH17597.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.840
SDH31001.1
Hypothetical protein.
       0.773
SDE99170.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
    
 0.772
SDG01947.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
     
 0.771
SDD72805.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
     
 0.661
SDD72854.1
5'-nucleotidase, C-terminal domain.
     
 0.661
SDG38975.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.659
SDE47329.1
Putative hydrolase of the HAD superfamily.
  
  
  0.636
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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