STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH39032.1Nucleotidyl transferase. (299 aa)    
Predicted Functional Partners:
SDH07319.1
Hypothetical protein.
  
  
 0.841
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
  0.774
SDE98287.1
Phosphoglucomutase.
  
  
  0.718
SDE64876.1
Acetolactate synthase, large subunit.
    
  0.576
SDE80857.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
    
  0.576
SDG90955.1
Acetolactate synthase, large subunit.
    
  0.576
SDE35135.1
Myo-inositol-1-phosphate synthase.
    
  0.549
SDE33483.1
2-Methylisocitrate lyase, PEP mutase family.
  
 
  0.504
SDH11910.1
2-Methylisocitrate lyase, PEP mutase family.
  
 
  0.504
SDH38985.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
       0.489
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.