STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH41358.1Por secretion system C-terminal sorting domain-containing protein. (730 aa)    
Predicted Functional Partners:
SDE71044.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.790
SDG80447.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.771
SDF34934.1
Hypothetical protein.
  
     0.770
SDF39653.1
Tetratricopeptide repeat-containing protein.
 
     0.769
SDH02887.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.767
SDE08016.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.765
SDD79784.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.761
SDD88865.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.759
SDH03036.1
Hypothetical protein.
  
     0.757
SDD83901.1
Protein of unknown function.
  
  
  0.756
Your Current Organism:
Dyadobacter soli
NCBI taxonomy Id: 659014
Other names: D. soli, DSM 25329, Dyadobacter soli Lee et al. 2010, Dyadobacter sp. MJ20, JCM 16232, KCTC 22481, strain MJ20
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