Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG86698.1 | KRG86699.1 | ABB34_05940 | ABB34_05945 | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | 0.410 |
KRG86698.1 | KRG86700.1 | ABB34_05940 | ABB34_05950 | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
KRG86699.1 | KRG86698.1 | ABB34_05945 | ABB34_05940 | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.410 |
KRG86699.1 | KRG86700.1 | ABB34_05945 | ABB34_05950 | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.747 |
KRG86699.1 | dnaK | ABB34_05945 | ABB34_02710 | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.897 |
KRG86700.1 | KRG86698.1 | ABB34_05950 | ABB34_05940 | Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
KRG86700.1 | KRG86699.1 | ABB34_05950 | ABB34_05945 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | 0.747 |
dnaK | KRG86699.1 | ABB34_02710 | ABB34_05945 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins. | 0.897 |