Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG83486.1 | KRG87285.1 | ABB34_11790 | ABB34_05095 | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.477 |
KRG83486.1 | aqpZ | ABB34_11790 | ABB34_11785 | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | Porin; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.461 |
KRG83486.1 | gpmA | ABB34_11790 | ABB34_11800 | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.414 |
KRG83486.1 | nfi | ABB34_11790 | ABB34_11795 | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | 0.535 |
KRG87285.1 | KRG83486.1 | ABB34_05095 | ABB34_11790 | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | 0.477 |
aqpZ | KRG83486.1 | ABB34_11785 | ABB34_11790 | Porin; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | 0.461 |
gpmA | KRG83486.1 | ABB34_11800 | ABB34_11790 | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | 0.414 |
gpmA | nfi | ABB34_11800 | ABB34_11795 | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | 0.743 |
nfi | KRG83486.1 | ABB34_11795 | ABB34_11790 | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. | 0.535 |
nfi | gpmA | ABB34_11795 | ABB34_11800 | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.743 |