STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000281085_01751Unannotated protein. (499 aa)    
Predicted Functional Partners:
GCA_000281085_01752
Unannotated protein.
 
     0.871
GCA_000281085_01753
Unannotated protein.
 
     0.798
GCA_000281085_00891
Unannotated protein.
 
  
  0.775
GCA_000281085_00685
Unannotated protein.
  
  0.769
GCA_000281085_02028
Unannotated protein.
 
     0.746
GCA_000281085_02027
Unannotated protein.
  
     0.734
GCA_000281085_01697
Unannotated protein.
  
     0.733
GCA_000281085_00879
Unannotated protein.
  
     0.730
GCA_000281085_00491
Unannotated protein.
  
 
 0.725
GCA_000281085_02030
Unannotated protein.
  
     0.723
Your Current Organism:
Catenovulum agarivorans YM01
NCBI taxonomy Id: 659495
Other names: C. agarivorans YM01, Catenovulum agarivorans str. YM01, Catenovulum agarivorans strain YM01, bacterium YM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.